• Skip to primary navigation
  • Skip to main content
  • Skip to primary sidebar
Well Fed Baker
  • Recipe Index
  • 30 Minute Meals
  • Pie Ebook
  • About
  • Newsletter
menu icon
go to homepage
  • Recipe Index
  • 30 Minute Meals
  • Pie Ebook
  • About
  • Newsletter
    • Facebook
    • Instagram
    • Pinterest
  • subscribe
    search icon
    Homepage link
    • Recipe Index
    • 30 Minute Meals
    • Pie Ebook
    • About
    • Newsletter
    • Facebook
    • Instagram
    • Pinterest
  • ×
    Home » Breakfast

    Gluten Free Lemon Poppy Seed Muffins

    Published: Jan 24, 2022 · Modified: Aug 7, 2023 by Tiffany · This post may contain affiliate links · 1 Comment.

     

     

    Jump to Recipe Print Recipe

    These gluten free lemon poppy seed muffins are just perfect! Trust me, I've done the research.

    Lemon poppy seed muffins have always been one of my favorite breakfast treats.  I used to visit a bakery near my house almost every morning to get one of their oversized lemon poppy seed muffins topped with crunchy sugar. Yum! These muffins are a pretty close copy of those delicious bakery muffins, made both gluten free and dairy free.  Hope you love them as much as I do!

    Lemon poppy seed muffins on a blue plate.

    If you love baking homemade muffins, make sure to check out all of my favorite gluten free muffin recipes.

    Jump to:
    • Why You'll Love This Muffin Recipe
    • Ingredients
    • Substitutions
    • How to Make Gluten Free Lemon Poppy Seed Muffins
    • Baking Tip
    • How to Store & Reheat Muffins
    • More lemon recipes to consider:
    • Recipe

    Why You'll Love This Muffin Recipe

    • It's easy to make and doesn't require a mixer.
    • The lemon flavor is light and sweet.  Perfect to brighten your morning.
    • They can be made into full size or mini muffins.
    • They are gluten free and dairy free.

    Ingredients

    Ingredients for gluten free lemon poppy seed muffins on a metal baking sheet.
    • Gluten Free 1-to-1 Flour Blend - I use Bob's Red Mill brand.  You can use your favorite blend, but the results may vary. If you use another type of gluten free flour, ensure it contains xanthan gum.
    • Sugar - The sweetness offsets the tart lemon flavor perfectly.
    • Salt - Salt is a critical ingredient in baked goods, don't be tempted to skip it.
    • Baking Powder - To help the muffins rise tall and stay soft and fluffy inside.
    • Poppy Seeds - While the poppy seeds don't add anything to the flavor of the muffin, they are one of the main ingredients of this traditional combo.
    • Egg - Just one egg in this muffin recipe. I haven't tried an egg replacement, but I replacing the egg with applesauce will work fine.
    • Oil - I use olive oil, but any light flavored cooking oil will work.
    • Non-dairy milk - I use either coconut milk or oat milk, but any non-dairy milk or regular milk will work in the same measure.
    • Lemon Zest and Lemon Juice - one lemon will provide enough zest and juice for this recipe.

    See the recipe card for complete list with measurements.

    Substitutions

    • Not dairy free - If you're not dairy free, use regular milk in place of non-dairy milk in the same measure.
    • Make it Vegan / Egg Free - I haven't tried it, but I'd suggest replacing the egg with ¼ cup of unsweetened applesauce. You won't get the rise that you get from the egg, because there are no bubbles being beaten into the batter so the muffins will be a little more dense after baking. But the flavor should still be wonderful.
    • No refined sugar - If you're avoiding refined sugar you can replace the ½ cup of sugar in this recipe with ⅓ cup of honey. You will also need to lower the temperature by 25 degrees, since honey will brown faster than regular sugar.

    How to Make Gluten Free Lemon Poppy Seed Muffins

    With all of my muffin recipes, I always use the muffin method for mixing. The muffin method is a fool proof way to get light texture muffins with gorgeous tall muffin tops.

    Flour, sugar, baking powder, salt, poppy seeds and lemon zest combined together in a large white bowl.

    STEP 1: Combine the gluten free flour, sugar, baking powder, salt, poppy seeds and lemon zest in a large bowl. Whisk together.

    A single egg whisked until frothy in a small white bowl.

    STEP 2: In a second smaller bowl, whisk the egg until it is frothy like soap bubbles.

    Oil, milk and lemon juice being whisked into the beaten egg in a small white bowl.

    STEP 3: Add the oil, milk and lemon juice to the egg and whisk until well combined.

    Wet ingredients being poured into the bowl of dry ingredients.

    STEP 4: Add the wet ingredients into the bowl of dry ingredients.

    Unbaked lemon poppy seed muffin batter in a large white bowl.

    STEP 5: Fold the batter together about 15 strokes until just combined, being careful not to over mix.

    Divide the batter into lined muffins cups and bake. This recipe makes 6 regular sized muffins or 12 mini muffins.

    Baking Tip

    To check for done: gently poke the top center of one muffin with your finger. If it springs right back it is baked through. If it leaves an indentation, bake another 2 minutes and recheck.

    A sliced gluten free lemon poppy seed muffin on a blue plate.

    How to Store & Reheat Muffins

    Store your leftover muffins in an airtight container at room temperature for up to 3 days.  To reheat, place one muffin the microwave for about 15 seconds.

    You can also freeze these muffins to eat later.  To enjoy, simply defrost overnight in the refrigerator and then reheat in the microwave until warm.

    More lemon recipes to consider:

    • gluten-free strawberry lemon scones
      Gluten Free Strawberry Lemon Scones
    • A lemon bundt cake topped with white icing served on a white plate.
      Gluten Free Lemon Pound Cake
    • lemon poppy seed scones
      Gluten Free Lemon Poppy Seed Scones
    • A sliced lemon loaf cake on a white marble cutting board.
      (Starbucks Copycat) Gluten Free Lemon Loaf

    If you try this recipe, please leave a 🌟🌟🌟🌟🌟 star rating and let me know how you liked it in the comments below.

    Recipe

    Gluten free lemon poppy seed muffin on a blue plate.

    Gluten Free Lemon Poppy Seed Muffins

    These muffins are filled with the bright flavor of lemon and made gluten free and dairy free
    Author: Tiffany
    5 from 4 votes
    Print Pin Rate
    Course: Breakfast
    Cuisine: American
    Prep Time: 10 minutes minutes
    Cook Time: 28 minutes minutes
    Total Time: 38 minutes minutes
    Servings: 6
    Calories: 220kcal
    Prevent your screen from going dark

    Ingredients

    • 1 Cup +3Tbsp Gluten Free 1-to-1 Flour Blend I use Bob's Red Mill
    • 1 ¼ teaspoon Baking Powder
    • ¼ teaspoon Salt
    • 1 Tablespoon Poppy Seeds
    • ½ Cup Sugar
    • 1 Tablespoon Lemon Zest from 1 lemon
    • 1 Egg
    • 3 Tablespoon Oil
    • 6 Tablespoon Non-Dairy Milk
    • 1 Tablespoon Lemon Juice from 1 lemon
    • 1 Tablespoon Turbinado Sugar optional for the tops

    Instructions

    • Preheat oven to 375F degrees. Line a muffin tin with 6 paper cups.
    • In a large bowl, combine flour, baking powder, salt, poppy seeds, sugar and lemon zest. Whisk together to mix. Set aside.
      1 Cup +3Tbsp Gluten Free 1-to-1 Flour Blend, 1 ¼ teaspoon Baking Powder, ¼ teaspoon Salt, 1 Tablespoon Poppy Seeds, ½ Cup Sugar, 1 Tablespoon Lemon Zest
    • In a second smaller bowl, crack your egg. Whisk the egg until it's frothy, like soap bubbles.
      1 Egg
    • Add the oil, milk and lemon juice to the egg. Whisk to combine.
      3 Tablespoon Oil, 6 Tablespoon Non-Dairy Milk, 1 Tablespoon Lemon Juice
    • Pour the wet ingredients into the dry. Fold together with a spatula about 10-15 strokes.
    • Divide the batter into the 6 muffin cups. Sprinkle the tops with coarse sugar.
      1 Tablespoon Turbinado Sugar
    • Bake in preheated oven for 26-28 minutes until tops spring back when gently poked.
    • Cool in the pan for 5-10 minutes, then serve.

    Notes

    For mini muffins, use a 12-muffin pan lined with mini muffin cups.  Bake for 20-22 minutes at 375 degrees.
    STORAGE: Store leftover muffins in an airtight container at room temperature for up to 3 days.
    FREEZING: Once muffins have cooled to room temperature, individually wrap each muffin in plastic wrap and place in an airtight container.  Freeze for up to 3 months.  Thaw overnight in the refrigerator before serving.
    Calories: 220kcal | Carbohydrates: 33g | Protein: 4g | Fat: 9g | Saturated Fat: 1g | Polyunsaturated Fat: 3g | Monounsaturated Fat: 5g | Trans Fat: 1g | Cholesterol: 27mg | Sodium: 204mg | Potassium: 47mg | Fiber: 3g | Sugar: 18g | Vitamin A: 99IU | Vitamin C: 3mg | Calcium: 111mg | Iron: 1mg
    Tried this recipe?Mention @wellfedbaker or tag #wellfedbaker!
    Tiffany

    Tiffany is the recipe developer, stylist and food photographer behind Well Fed Baker. As a lifelong baker who had to go gluten free and dairy free in 2016, Tiffany strives to share allergen friendly recipes that never feel like they are free from anything.

    Reader Interactions

    Comments

    1. Christy Sample says

      February 03, 2022 at 9:24 pm

      5 stars
      Easy to make. Very flavorful.

      Reply
    5 from 4 votes (3 ratings without comment)

    Leave a Comment Cancel reply

    Your email address will not be published. Required fields are marked *

    Recipe Rating





    Primary Sidebar

     

     

    A photo of Tiffany Welsh.

    Hey, I'm Tiffany!

    I love sharing gluten-free comfort food and homestyle baking, featuring Dutch oven meals, nostalgic dinners, classic baked goods, with dairy-free or allergen-friendly options. My recipes lean Southern, seasonal, and practical.

    More About Me

    Strawberry Season

    • A slice of strawberry delight served on a white plate.
      No Bake Strawberry Delight
    • A serving spoon scooping out strawberry cobbler from a white baking dish.
      Easy Strawberry Cobbler Recipe
    • A strawberry pound cake on a white serving plate sitting on a pink table.
      Fresh Strawberry Pound Cake
    • A slice of strawberry blueberry pie topped with star shaped pie crust on a white plate.
      Strawberry Blueberry Pie
    • Sliced strawberry crumb cake stacked on a table.
      Strawberry Crumb Cake
    • Two strawberry waffles topped with syrup and slices of fresh strawberries.
      Gluten Free Strawberry Waffles
    Ad for Perfect Gluten Free Pies cookbook.

    What's Trending

    • Crispy pork carnitas on a sheet pan garnished with lime and cilantro.
      Best Dutch Oven Carnitas (Mexican Pulled Pork)
    • A serving dish of green beans and potatoes with bacon.
      Southern Green Beans and Potatoes
    • A glass bowl filled with air fryer popcorn.
      Air Fryer Popcorn
    • A pan of dairy free Marry Me Chicken sitting on a marble counter.
      Dairy Free Marry Me Chicken
    • Four baked panko chicken breasts sitting on a baking sheet.
      Crispy Baked Panko Chicken
    • A sliced chicken breast drizzled with spicy honey sauce on a serving tray.
      Baked Spicy Honey Chicken
    • Recipe Index
    • 30 Minute Meals
    • Pie Ebook
    • About
    • Newsletter

    Footer

     

     

    ↑ back to top

    About

    • Accessibility Policy
    • Privacy Policy

    Newsletter

    • Sign Up! for emails and updates

    Contact

    • Work With Me
    • About

    As an Amazon Associate I earn from qualifying purchases.

    Copyright © 2015-2025 Wellfedbaker

    Rate This Recipe

    Your vote:




    A rating is required
    A name is required
    An email is required

    Recipe Ratings without Comment

    Something went wrong. Please try again.